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protein structural domain enrichment analysis  (InterPro Inc)

 
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    Structured Review

    InterPro Inc protein structural domain enrichment analysis
    <t>Domain</t> annotation and subcellular localization of DEPs. A <t>Protein</t> <t>structural</t> domain <t>enrichment</t> <t>analysis</t> of DEPs using the InterPro database. Among all enrichment results, the pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753, adjusted p -value = 2.10 × 10⁻. 5 ) exhibited the most significant enrichment. B Subcellular localization prediction of DEP. The majority of DEPs localized to the mitochondria (28.62%), followed by nucleus (22.30%) and cytoplasm (16.36%), implicating mitochondrial dysfunction in the disease phenotype. C GSEA of subcellular localized DEPs demonstrated that mitochondrial proteins exhibited the most statistically significant enrichment (NES = −1.85, adjusted p -value < 0.001)
    Protein Structural Domain Enrichment Analysis, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/protein+domain+structures/pmc12090654-171-1-10?v=InterPro+Inc
    Average 90 stars, based on 1 article reviews
    protein structural domain enrichment analysis - by Bioz Stars, 2026-07
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    Images

    1) Product Images from "4D quantitative proteomics of ovarian granulosa cells reveals the involvement of oxidative phosphorylation in non-elderly women with diminished ovarian reserve"

    Article Title: 4D quantitative proteomics of ovarian granulosa cells reveals the involvement of oxidative phosphorylation in non-elderly women with diminished ovarian reserve

    Journal: Journal of Ovarian Research

    doi: 10.1186/s13048-025-01688-1

    Domain annotation and subcellular localization of DEPs. A Protein structural domain enrichment analysis of DEPs using the InterPro database. Among all enrichment results, the pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753, adjusted p -value = 2.10 × 10⁻. 5 ) exhibited the most significant enrichment. B Subcellular localization prediction of DEP. The majority of DEPs localized to the mitochondria (28.62%), followed by nucleus (22.30%) and cytoplasm (16.36%), implicating mitochondrial dysfunction in the disease phenotype. C GSEA of subcellular localized DEPs demonstrated that mitochondrial proteins exhibited the most statistically significant enrichment (NES = −1.85, adjusted p -value < 0.001)
    Figure Legend Snippet: Domain annotation and subcellular localization of DEPs. A Protein structural domain enrichment analysis of DEPs using the InterPro database. Among all enrichment results, the pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753, adjusted p -value = 2.10 × 10⁻. 5 ) exhibited the most significant enrichment. B Subcellular localization prediction of DEP. The majority of DEPs localized to the mitochondria (28.62%), followed by nucleus (22.30%) and cytoplasm (16.36%), implicating mitochondrial dysfunction in the disease phenotype. C GSEA of subcellular localized DEPs demonstrated that mitochondrial proteins exhibited the most statistically significant enrichment (NES = −1.85, adjusted p -value < 0.001)

    Techniques Used: Binding Assay

    PPI network analysis of DEPs. A The network was constructed using the STRING database (confidence score ≥ 0.7) and visualized in Cytoscape. B GO enrichment analysis of the top two protein clusters based on MCODE algorithm. Significantly enriched biological processes included “mitochondrial matrix” (GO:0005759), followed by “oxidoreductase activity” (GO:0016491), and “amide biosynthetic process” (GO:0043604)
    Figure Legend Snippet: PPI network analysis of DEPs. A The network was constructed using the STRING database (confidence score ≥ 0.7) and visualized in Cytoscape. B GO enrichment analysis of the top two protein clusters based on MCODE algorithm. Significantly enriched biological processes included “mitochondrial matrix” (GO:0005759), followed by “oxidoreductase activity” (GO:0016491), and “amide biosynthetic process” (GO:0043604)

    Techniques Used: Construct, Activity Assay



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    Image Search Results


    Domain annotation and subcellular localization of DEPs. A Protein structural domain enrichment analysis of DEPs using the InterPro database. Among all enrichment results, the pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753, adjusted p -value = 2.10 × 10⁻. 5 ) exhibited the most significant enrichment. B Subcellular localization prediction of DEP. The majority of DEPs localized to the mitochondria (28.62%), followed by nucleus (22.30%) and cytoplasm (16.36%), implicating mitochondrial dysfunction in the disease phenotype. C GSEA of subcellular localized DEPs demonstrated that mitochondrial proteins exhibited the most statistically significant enrichment (NES = −1.85, adjusted p -value < 0.001)

    Journal: Journal of Ovarian Research

    Article Title: 4D quantitative proteomics of ovarian granulosa cells reveals the involvement of oxidative phosphorylation in non-elderly women with diminished ovarian reserve

    doi: 10.1186/s13048-025-01688-1

    Figure Lengend Snippet: Domain annotation and subcellular localization of DEPs. A Protein structural domain enrichment analysis of DEPs using the InterPro database. Among all enrichment results, the pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain (IPR023753, adjusted p -value = 2.10 × 10⁻. 5 ) exhibited the most significant enrichment. B Subcellular localization prediction of DEP. The majority of DEPs localized to the mitochondria (28.62%), followed by nucleus (22.30%) and cytoplasm (16.36%), implicating mitochondrial dysfunction in the disease phenotype. C GSEA of subcellular localized DEPs demonstrated that mitochondrial proteins exhibited the most statistically significant enrichment (NES = −1.85, adjusted p -value < 0.001)

    Article Snippet: A Protein structural domain enrichment analysis of DEPs using the InterPro database.

    Techniques: Binding Assay

    PPI network analysis of DEPs. A The network was constructed using the STRING database (confidence score ≥ 0.7) and visualized in Cytoscape. B GO enrichment analysis of the top two protein clusters based on MCODE algorithm. Significantly enriched biological processes included “mitochondrial matrix” (GO:0005759), followed by “oxidoreductase activity” (GO:0016491), and “amide biosynthetic process” (GO:0043604)

    Journal: Journal of Ovarian Research

    Article Title: 4D quantitative proteomics of ovarian granulosa cells reveals the involvement of oxidative phosphorylation in non-elderly women with diminished ovarian reserve

    doi: 10.1186/s13048-025-01688-1

    Figure Lengend Snippet: PPI network analysis of DEPs. A The network was constructed using the STRING database (confidence score ≥ 0.7) and visualized in Cytoscape. B GO enrichment analysis of the top two protein clusters based on MCODE algorithm. Significantly enriched biological processes included “mitochondrial matrix” (GO:0005759), followed by “oxidoreductase activity” (GO:0016491), and “amide biosynthetic process” (GO:0043604)

    Article Snippet: A Protein structural domain enrichment analysis of DEPs using the InterPro database.

    Techniques: Construct, Activity Assay